Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: Scnm1 ENSRNOG00000021092

.

Description

sodium channel modifier 1 [Source:RGD Symbol;Acc:1308968]

Gene Synonyms

LOC310662

Location

Primary_assembly 2: 185,389,892-185,394,214 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 2 transcripts (splice variants), 189 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000028639.7	Scnm1-201	1327	296aa	ENSRNOP00000028639.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZSG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000116995.2	Scnm1-202	606	164aa	ENSRNOP00000084017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZYA6	-

.

Gene tree

.

.