Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Pspc1 ENSRNOG00000020782

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Description

paraspeckle component 1 [Source:RGD Symbol;Acc:1310122]

Gene Synonyms

LOC305910, MGC116378

Location

Primary_assembly 15: 34,967,477-35,026,828 reverse strand.

GRCr8:CM070405.1

About this gene

This gene has 2 transcripts (splice variants), 206 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000028219.8	Pspc1-201	2004	522aa	ENSRNOP00000028219.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KHA3 Q4KLH4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000076913.4	Pspc1-202	1917	493aa	ENSRNOP00000097819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ATP2	-

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Gene tree

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