Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Abca1 ENSRNOG00000018126

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Description

ATP binding cassette subfamily A member 1 [Source:RGD Symbol;Acc:631344]

Location

Primary_assembly 5: 72,473,676-72,596,473 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 3 transcripts (splice variants), 302 orthologues, 15 paralogues and is associated with 35 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000110113.2	Abca1-202	10322	2263aa	ENSRNOP00000078596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZLK5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000024564.9	Abca1-201	10316	2261aa	ENSRNOP00000024564.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KDN7 F1LNL3	-
ENSRNOT00000114269.2	Abca1-203	10283	2250aa	ENSRNOP00000095590.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ATT1	-

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Gene tree

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