Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: Spns3 ENSRNOG00000015873

.

Description

sphingolipid transporter 3 [Source:RGD Symbol;Acc:1561884]

Gene Synonyms

LOC497946, RGD1561884

Location

Primary_assembly 10: 57,612,819-57,667,414 reverse strand.

GRCr8:CM070400.1

About this gene

This gene has 3 transcripts (splice variants), 196 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000110777.2	Spns3-202	2002	514aa	ENSRNOP00000080396.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZPL7 A6HGG2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000041886.4	Spns3-201	1829	492aa	ENSRNOP00000050332.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HGG1 D3ZCZ0	-
ENSRNOT00000124618.1	Spns3-203	1821	481aa	ENSRNOP00000104085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

.

Gene tree

.

.