Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pdlim7 ENSRNOG00000013653

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Description

PDZ and LIM domain 7 [Source:RGD Symbol;Acc:628769]

Gene Synonyms

LMP

Location

Primary_assembly 17: 9,129,525-9,144,956 forward strand.

GRCr8:CM070407.1

About this gene

This gene has 5 transcripts (splice variants), 198 orthologues, 7 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000132138.1	Pdlim7-205	1973	571aa	ENSRNOP00000106980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000018899.5	Pdlim7-201	1727	464aa	ENSRNOP00000018899.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2UJ95	-
ENSRNOT00000095062.2	Pdlim7-202	1673	446aa	ENSRNOP00000093838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AKU2	-
ENSRNOT00000095625.2	Pdlim7-203	1603	423aa	ENSRNOP00000092912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GK07	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000115581.2	Pdlim7-204	1002	222aa	ENSRNOP00000092278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AH90 A6KAR6	-

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Gene tree

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