Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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- Structural variants
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Molecular interactions
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ID History
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Gene: Gpatch1 ENSRNOG00000011584

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Description

G patch domain containing 1 [Source:RGD Symbol;Acc:1308935]

Gene Synonyms

Gpatc1, LOC292810

Location

Primary_assembly 1: 97,062,551-97,111,465 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000123176.1	Gpatch1-202	3048	955aa	ENSRNOP00000103195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000148833.1	Gpatch1-204	3096	944aa	ENSRNOP00000102476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000015791.9	Gpatch1-201	3061	930aa	ENSRNOP00000015791.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JAA7 F1LU70	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000134965.1	Gpatch1-203	2953	894aa	ENSRNOP00000107878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Gene tree

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