Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Mmp1b ENSRNOG00000008881

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Description

matrix metallopeptidase 1b (interstitial collagenase) [Source:RGD Symbol;Acc:1306843]

Gene Synonyms

LOC100910997, LOC300338

Location

Primary_assembly 8: 12,882,706-12,935,872 reverse strand.

GRCr8:CM070398.1

About this gene

This gene has 2 transcripts (splice variants), 315 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000011884.7	Mmp1b-201	1935	460aa	ENSRNOP00000011884.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZRZ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000163655.1	Mmp1b-202	2171	418aa	ENSRNOP00000104602.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JN30	-

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Gene tree

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