Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Cc2d1b ENSRNOG00000008634

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Description

coiled-coil and C2 domain containing 1B [Source:RGD Symbol;Acc:1306630]

Gene Synonyms

LOC313478, MGC109203, RGD1306630

Location

Primary_assembly 5: 128,581,994-128,596,022 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 2 transcripts (splice variants), 194 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000011670.9	Cc2d1b-201	3330	850aa	ENSRNOP00000011670.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5FVK6-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000097235.2	Cc2d1b-202	3324	848aa	ENSRNOP00000088232.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A5T1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Gene tree

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