Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Stx18 ENSRNOG00000006139

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Description

syntaxin 18 [Source:RGD Symbol;Acc:1310058]

Gene Synonyms

LOC360953

Location

Primary_assembly 14: 76,883,770-76,973,726 reverse strand.

GRCr8:CM070404.1

About this gene

This gene has 3 transcripts (splice variants), 211 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000008410.7	Stx18-201	1580	364aa	ENSRNOP00000008410.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q3A3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000095745.2	Stx18-202	1490	334aa	ENSRNOP00000082982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IJV2 Q68FW4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000117249.2	Stx18-203	1412	308aa	ENSRNOP00000087475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A489 A6IJV1	-

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Gene tree

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