Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Cacnb1 ENSRNOG00000004518

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Description

calcium voltage-gated channel auxiliary subunit beta 1 [Source:RGD Symbol;Acc:68382]

Gene Synonyms

CAB1

Location

Primary_assembly 10: 83,494,509-83,515,146 reverse strand.

GRCr8:CM070400.1

About this gene

This gene has 3 transcripts (splice variants), 212 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000082974.3	Cacnb1-202	3528	642aa	ENSRNOP00000073177.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K4U4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000006098.7	Cacnb1-201	3393	597aa	ENSRNOP00000006098.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HIP2 G3V6K8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000108528.2	Cacnb1-203	2634	477aa	ENSRNOP00000091590.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ASP4	-

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Gene tree

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