Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gtf2a1 ENSRNOG00000004300

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Description

general transcription factor 2A subunit 1 [Source:RGD Symbol;Acc:69246]

Gene Synonyms

Tf2a, TfIIa

Location

Primary_assembly 6: 116,219,614-116,252,220 reverse strand.

GRCr8:CM070396.1

About this gene

This gene has 3 transcripts (splice variants), 213 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000119546.2	Gtf2a1-203	5993	377aa	ENSRNOP00000091168.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6APY1 A6JEC8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000005873.5	Gtf2a1-201	5710	364aa	ENSRNOP00000005873.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O08949	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000104002.2	Gtf2a1-202	5544	375aa	ENSRNOP00000086237.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A0U6	-

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Gene tree

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