Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Tlr6 ENSRNOG00000002161

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Description

toll-like receptor 6 [Source:RGD Symbol;Acc:1303030]

Location

Primary_assembly 14: 43,698,751-43,740,462 forward strand.

GRCr8:CM070404.1

About this gene

This gene has 6 transcripts (splice variants), 191 orthologues, 26 paralogues and is associated with 16 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000076753.4	Tlr6-202	2940	827aa	ENSRNOP00000068444.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MKA9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000128820.1	Tlr6-205	4738	806aa	ENSRNOP00000111954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JDF8	-
ENSRNOT00000108237.2	Tlr6-203	4421	806aa	ENSRNOP00000081116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MKA9 A6JDF8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000002933.7	Tlr6-201	2996	752aa	ENSRNOP00000002933.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V695	-
ENSRNOT00000126180.1	Tlr6-204	2821	736aa	ENSRNOP00000107154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000138938.1	Tlr6-206	2583	729aa	ENSRNOP00000107323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Gene tree

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