Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Prf1 ENSRNOG00000000562

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Description

perforin 1 [Source:RGD Symbol;Acc:708463]

Gene Synonyms

Cyta, MGC108712, P1

Location

Primary_assembly 20: 29,788,972-29,795,124 forward strand.

GRCr8:CM070410.1

About this gene

This gene has 2 transcripts (splice variants), 284 orthologues, 37 paralogues and is associated with 33 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000100131.2	Prf1-202	2700	585aa	ENSRNOP00000078379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZKR3 A6K3Z3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000000681.8	Prf1-201	1701	526aa	ENSRNOP00000000681.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7EPF5	-

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Gene tree

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