Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Trnau1ap ENSRNOG00000055344

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Description

tRNA selenocysteine 1 associated protein 1 [Source:RGD Symbol;Acc:619995]

Gene Synonyms

LOC100365522, LOC682894, Secp43, Trspap1

Location

Primary_assembly 5: 149,791,631-149,808,680 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 5 transcripts (splice variants), 208 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000123742.1	Trnau1ap-205	1635	448aa	ENSRNOP00000098692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000086131.3	Trnau1ap-201	965	280aa	ENSRNOP00000070906.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JZ46	-
ENSRNOT00000113510.2	Trnau1ap-204	965	173aa	ENSRNOP00000084120.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9QZI7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000102379.2	Trnau1ap-203	955	247aa	ENSRNOP00000088939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A7J2	-
ENSRNOT00000098219.2	Trnau1ap-202	823	203aa	ENSRNOP00000085714.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A451	-

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Paralogues

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