Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Tnfrsf1a ENSRNOG00000031312

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Description

TNF receptor superfamily member 1A [Source:RGD Symbol;Acc:621237]

Gene Synonyms

MGC105478, TNF-R1, TNF-RI, TNFR-1, TNFR-I, Tnfr1, p55, p60

Location

Primary_assembly 4: 159,837,032-159,849,816 forward strand.

GRCr8:CM070394.1

About this gene

This gene has 3 transcripts (splice variants), 188 orthologues, 20 paralogues and is associated with 105 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000102042.2	Tnfrsf1a-202	2364	515aa	ENSRNOP00000092064.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GJG3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000048529.6	Tnfrsf1a-201	2202	461aa	ENSRNOP00000042371.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JSU9 A6ILU2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000113507.2	Tnfrsf1a-203	1813	439aa	ENSRNOP00000080227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZPP1	-

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Paralogues

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