Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Sema4b ENSRNOG00000025167

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Description

semaphorin 4B [Source:RGD Symbol;Acc:1307872]

Gene Synonyms

LOC293042

Location

Primary_assembly 1: 143,537,690-143,587,037 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 3 transcripts (splice variants), 254 orthologues, 19 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000030914.8	Sema4b-201	3797	954aa	ENSRNOP00000030864.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LSV0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000171530.1	Sema4b-203	4405	821aa	ENSRNOP00000104021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JC85	-
ENSRNOT00000108313.2	Sema4b-202	3455	799aa	ENSRNOP00000092953.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AWC2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Paralogues

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