Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tcaf1 ENSRNOG00000017911

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Description

TRPM8 channel-associated factor 1 [Source:RGD Symbol;Acc:1565474]

Gene Synonyms

Fam115a, LOC362353, RGD1565474

Location

Primary_assembly 4: 72,589,710-72,639,475 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 1 transcript (splice variant), 311 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000024428.9	Tcaf1-201	5825	1011aa	ENSRNOP00000024428.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3Z8A4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Paralogues

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