Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Shox2 ENSRNOG00000012478

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Description

SHOX homeobox 2 [Source:RGD Symbol;Acc:3674]

Location

Primary_assembly 2: 153,527,571-153,537,161 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 1 transcript (splice variant), 115 orthologues, 44 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000016843.7	Shox2-201	2549	331aa	ENSRNOP00000016843.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J5K8 G3V7M9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Paralogues

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