Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Slc6a6 ENSRNOG00000009019

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Description

solute carrier family 6 member 6 [Source:RGD Symbol;Acc:61912]

Location

Primary_assembly 4: 125,752,372-125,826,032 forward strand.

GRCr8:CM070394.1

About this gene

This gene has 3 transcripts (splice variants), 293 orthologues, 20 paralogues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000086982.3	Slc6a6-202	2284	633aa	ENSRNOP00000072080.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K227	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000012875.8	Slc6a6-201	2710	631aa	ENSRNOP00000012875.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AL67 P31643	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000103627.2	Slc6a6-203	1023	210aa	ENSRNOP00000087986.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6X3	-

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Paralogues

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