Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Jag1 ENSRNOG00000007443

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Description

jagged canonical Notch ligand 1 [Source:RGD Symbol;Acc:2937]

Location

Primary_assembly 3: 144,859,453-144,894,872 reverse strand.

GRCr8:CM070393.1

About this gene

This gene has 3 transcripts (splice variants), 172 orthologues, 5 paralogues and is associated with 42 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000010638.9	Jag1-201	5589	1219aa	ENSRNOP00000010638.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HQK8 G3V710	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000094546.2	Jag1-202	5517	1195aa	ENSRNOP00000097522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ASU4	-
ENSRNOT00000158820.1	Jag1-203	5342	1194aa	ENSRNOP00000105256.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Paralogues

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