Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Lhx6 ENSRNOG00000005996

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Description

LIM homeobox 6 [Source:RGD Symbol;Acc:1306174]

Gene Synonyms

LOC311901

Location

Primary_assembly 3: 39,830,990-39,853,559 reverse strand.

GRCr8:CM070393.1

About this gene

This gene has 3 transcripts (splice variants), 271 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000008817.6	Lhx6-201	2379	392aa	ENSRNOP00000008817.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZDG6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000093874.2	Lhx6-202	2334	377aa	ENSRNOP00000097190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AN85	-
ENSRNOT00000125197.1	Lhx6-203	2307	368aa	ENSRNOP00000109157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Paralogues

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