Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cntn4 ENSRNOG00000005652

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Description

contactin 4 [Source:RGD Symbol;Acc:621361]

Gene Synonyms

Big-2

Location

Primary_assembly 4: 140,596,284-141,177,766 forward strand.

GRCr8:CM070394.1

About this gene

This gene has 5 transcripts (splice variants), 242 orthologues, 35 paralogues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000120833.2	Cntn4-204	5281	1025aa	ENSRNOP00000098446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000007788.8	Cntn4-201	4188	1025aa	ENSRNOP00000007788.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JVI9 Q62845	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000120834.2	Cntn4-205	3987	924aa	ENSRNOP00000098447.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000120825.2	Cntn4-203	3921	927aa	ENSRNOP00000098438.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000111049.3	Cntn4-202	2371	705aa	ENSRNOP00000086586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A640	-

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Paralogues

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