Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Prom1 ENSRNOG00000003098

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Description

prominin 1 [Source:RGD Symbol;Acc:69367]

Gene Synonyms

CD133, MGC156650, Prom

Location

Primary_assembly 14: 71,202,336-71,307,002 forward strand.

GRCr8:CM070404.1

About this gene

This gene has 8 transcripts (splice variants), 277 orthologues, 1 paralogue and is associated with 26 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000083701.3	Prom1-203	3920	866aa	ENSRNOP00000069832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JWD0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000113497.2	Prom1-206	3893	857aa	ENSRNOP00000080859.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQT1	-
ENSRNOT00000163101.1	Prom1-208	3859	810aa	ENSRNOP00000110983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000082592.3	Prom1-202	3674	841aa	ENSRNOP00000071297.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K044	-
ENSRNOT00000004231.8	Prom1-201	3643	841aa	ENSRNOP00000004231.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q91XN5	-
ENSRNOT00000118243.2	Prom1-207	3087	808aa	ENSRNOP00000097023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GLV7	-
ENSRNOT00000084322.3	Prom1-205	2948	834aa	ENSRNOP00000068615.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JT89	-
ENSRNOT00000084274.3	Prom1-204	1356	85aa	ENSRNOP00000071743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0JN22	-

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Paralogues

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