Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Itga6 ENSRNOG00000001518

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Description

integrin subunit alpha 6 [Source:RGD Symbol;Acc:621633]

Location

Primary_assembly 3: 77,017,766-77,097,076 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 5 transcripts (splice variants), 228 orthologues, 17 paralogues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000157671.1	Itga6-205	4584	1129aa	ENSRNOP00000111703.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000002075.6	Itga6-201	6081	1112aa	ENSRNOP00000002075.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V667	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000105449.2	Itga6-203	6049	1073aa	ENSRNOP00000087175.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A5C8	-
ENSRNOT00000107088.2	Itga6-204	6015	1085aa	ENSRNOP00000082677.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G9S4	-
ENSRNOT00000097968.2	Itga6-202	5949	1068aa	ENSRNOP00000094358.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJE9	-

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Paralogues

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