Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Safb ENSRNOG00000050543

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Description

scaffold attachment factor B [Source:RGD Symbol;Acc:620613]

Gene Synonyms

SAF-B, SAF-B1

Location

Primary_assembly 9: 1,504,456-1,525,781 forward strand.

GRCr8:CM070399.1

About this gene

This gene has 6 transcripts (splice variants), 233 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000072868.3	Safb-201	3148	931aa	ENSRNOP00000066884.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0RBF0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000151400.1	Safb-206	3162	883aa	ENSRNOP00000106846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000089164.3	Safb-203	3024	914aa	ENSRNOP00000071054.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JZI0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000115105.2	Safb-204	2968	930aa	ENSRNOP00000077699.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5XWF1	-
ENSRNOT00000081770.3	Safb-202	2909	907aa	ENSRNOP00000069796.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JW97	-
ENSRNOT00000115324.2	Safb-205	1918	619aa	ENSRNOP00000088136.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A5W2	-

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Orthologues

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