Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Gene: Rundc1 ENSRNOG00000023768

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Description

RUN domain containing 1 [Source:RGD Symbol;Acc:1307490]

Gene Synonyms

LOC303552

Location

Primary_assembly 10: 86,861,724-86,875,770 forward strand.

GRCr8:CM070400.1

About this gene

This gene has 3 transcripts (splice variants), 196 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000031208.6	Rundc1-201	3448	617aa	ENSRNOP00000031132.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LVT5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000107266.2	Rundc1-202	3448	617aa	ENSRNOP00000090540.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEI2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000149927.1	Rundc1-203	2113	561aa	ENSRNOP00000103443.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Orthologues

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