Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Spata31f3 ENSRNOG00000022751

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Description

SPATA31 subfamily F member 3 [Source:RGD Symbol;Acc:1561387]

Gene Synonyms

Fam205c, Fam205cp, LOC500445

Location

Primary_assembly 5: 61,882,627-61,889,008 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 3 transcripts (splice variants), 86 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000085709.3	Spata31f3-202	1381	351aa	ENSRNOP00000069401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JV98	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000031509.6	Spata31f3-201	1874	329aa	ENSRNOP00000038393.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHW0 A6IIY9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000113612.2	Spata31f3-203	1307	318aa	ENSRNOP00000094084.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AM14	-

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Orthologues

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