Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ctss ENSRNOG00000021157

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Description

cathepsin S [Source:RGD Symbol;Acc:621513]

Location

Primary_assembly 2: 185,775,296-185,803,440 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 6 transcripts (splice variants), 269 orthologues, 27 paralogues and is associated with 29 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000138785.1	Ctss-204	1536	381aa	ENSRNOP00000106954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000105420.2	Ctss-203	1535	341aa	ENSRNOP00000092901.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AES4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000170311.1	Ctss-206	1475	321aa	ENSRNOP00000099677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000028732.9	Ctss-201	1300	329aa	ENSRNOP00000028732.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZZR3	-
ENSRNOT00000160955.1	Ctss-205	1296	345aa	ENSRNOP00000107458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000102986.2	Ctss-202	1231	306aa	ENSRNOP00000088061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AHZ2	-

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Orthologues

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