Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Prpf4b ENSRNOG00000016705

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Description

pre-mRNA processing factor 4B [Source:RGD Symbol;Acc:1307784]

Gene Synonyms

LOC291078, Prp4k

Location

Primary_assembly 17: 30,193,907-30,225,420 reverse strand.

GRCr8:CM070407.1

About this gene

This gene has 5 transcripts (splice variants), 232 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000168738.1	Prpf4b-205	4568	1027aa	ENSRNOP00000101483.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000081993.3	Prpf4b-202	4353	1007aa	ENSRNOP00000072106.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K249 Q5RKH1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000022902.9	Prpf4b-201	4273	995aa	ENSRNOP00000022902.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QC63	-
ENSRNOT00000160050.1	Prpf4b-204	3996	888aa	ENSRNOP00000102630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000120267.2	Prpf4b-203	3940	884aa	ENSRNOP00000092761.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEI6	-

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Orthologues

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