Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: Sp7 ENSRNOG00000014082

.

Description

Sp7 transcription factor [Source:RGD Symbol;Acc:631377]

Gene Synonyms

Osx

Location

Primary_assembly 7: 135,363,199-135,373,559 reverse strand.

GRCr8:CM070397.1

About this gene

This gene has 3 transcripts (splice variants), 187 orthologues, 22 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000018828.5	Sp7-201	2574	457aa	ENSRNOP00000018828.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6IMK2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000081758.3	Sp7-202	3239	410aa	ENSRNOP00000074457.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6IMK1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000147039.1	Sp7-203	3042	410aa	ENSRNOP00000110634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

.

Orthologues

.

.