Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Repin1 ENSRNOG00000008239

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Description

replication initiator 1 [Source:RGD Symbol;Acc:1549707]

Gene Synonyms

Ap-4, Ap4

Location

Primary_assembly 4: 78,880,976-78,886,413 forward strand.

GRCr8:CM070394.1

About this gene

This gene has 5 transcripts (splice variants), 81 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000117289.2	Repin1-202	2959	604aa	ENSRNOP00000088288.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q68H95	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000138782.1	Repin1-204	4036	548aa	ENSRNOP00000104933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000128613.1	Repin1-203	3334	548aa	ENSRNOP00000108203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000146767.1	Repin1-205	3026	548aa	ENSRNOP00000103203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000011032.6	Repin1-201	2943	580aa	ENSRNOP00000011032.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHG5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Orthologues

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