Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Zbtb1 ENSRNOG00000058593

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Description

zinc finger and BTB domain containing 1 [Source:RGD Symbol;Acc:1303095]

Location

Primary_assembly 6: 100,838,714-100,852,643 forward strand.

GRCr8:CM070396.1

About this gene

This gene has 5 transcripts (splice variants), 200 orthologues and 38 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000117277.2	Zbtb1-202	3284	757aa	ENSRNOP00000080670.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q672J3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000124783.1	Zbtb1-204	7562	713aa	ENSRNOP00000104817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRA2	-
ENSRNOT00000144490.1	Zbtb1-205	7562	713aa	ENSRNOP00000106278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRA2	-
ENSRNOT00000110356.2	Zbtb1-201	3465	713aa	ENSRNOP00000097406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRA2 Q672J3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000119538.2	Zbtb1-203	3255	713aa	ENSRNOP00000081356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRA2 Q672J3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data