Gene: Paip1 ENSRNOG00000058580

Description

poly(A) binding protein interacting protein 1 [Source:RGD Symbol;Acc:1305668]

Gene Synonyms

LOC365684

Location

Primary_assembly 2: 53,237,924-53,282,966 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 3 transcripts (splice variants), 223 orthologues, 2 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000091387.3	Paip1-202	2966	526aa	ENSRNOP00000069568.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JVP5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000161538.1	Paip1-203	2996	514aa	ENSRNOP00000112856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000081157.3	Paip1-201	2656	412aa	ENSRNOP00000069142.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZZF8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,