Gene: Ccdc148 ENSRNOG00000057740

Description

coiled-coil domain containing 148 [Source:RGD Symbol;Acc:1561169]

Gene Synonyms

LOC311051, RGD1561169

Location

GRCr8:CM070393.1

About this gene

This gene has 2 transcripts (splice variants), 184 orthologues, 1 paralogue and is associated with 1 phenotype.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000091777.3	Ccdc148-202	2340	599aa	ENSRNOP00000072674.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JF61 E9PU06	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000086371.3	Ccdc148-201	1101	263aa	ENSRNOP00000075475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2RZ45	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.