Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RGD1564409 ENSRNOG00000057162

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Description

similar to hypothetical protein 4930509O22 [Source:RGD Symbol;Acc:1564409]

Gene Synonyms

LOC314670, LOC368175

Location

Primary_assembly 7: 17,311,697-17,330,495 forward strand.

mRatBN7.2:CM026980.1

About this gene

This gene has 3 transcripts (splice variants), 97 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000116313.1	RGD1564409-203	7162	493aa	ENSRNOP00000077205.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K6V9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000097023.1	RGD1564409-202	6921	493aa	ENSRNOP00000091523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K6V9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000080523.2	RGD1564409-201	1842	493aa	ENSRNOP00000073961.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K6V9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data