Gene: Gtf2a2 ENSRNOG00000056701

Description

general transcription factor 2A subunit 2 [Source:RGD Symbol;Acc:620720]

Gene Synonyms

MGC188808

Location

Primary_assembly 8: 79,547,307-79,565,408 forward strand.

GRCr8:CM070398.1

About this gene

This gene has 5 transcripts (splice variants), 93 orthologues, 1 paralogue and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000090951.3	Gtf2a2-203	585	136aa	ENSRNOP00000080940.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRD7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000115150.2	Gtf2a2-205	678	61aa	ENSRNOP00000091233.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AF75 B5DEM4	-
ENSRNOT00000085496.3	Gtf2a2-202	638	109aa	ENSRNOP00000068825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KEU8 O08950	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000084148.3	Gtf2a2-201	629	106aa	ENSRNOP00000071778.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K1B8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000112984.2	Gtf2a2-204	237	68aa	ENSRNOP00000077033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZJD1 A6KEU5	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Gtf2a2 ENSRNOG00000056701

Strains

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Gene: Gtf2a2 ENSRNOG00000056701

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