Summary
- Splice variants
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Sequence
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Comparative Genomics
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Phenotypes
Genetic Variation
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Gene: Erich2 ENSRNOG00000056087

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Description

glutamate-rich 2 [Source:RGD Symbol;Acc:1563852]

Gene Synonyms

LOC499806

Location

Primary_assembly 3: 75,718,720-75,755,446 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 4 transcripts (splice variants), 128 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000104388.2	Erich2-202	1752	459aa	ENSRNOP00000081970.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZUV0 A6HM31	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000171746.1	Erich2-204	1789	399aa	ENSRNOP00000105799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000077551.3	Erich2-201	1695	440aa	ENSRNOP00000072627.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q66H03	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000115897.2	Erich2-203	1541	433aa	ENSRNOP00000084370.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZYW0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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