Gene: Gabrq ENSRNOG00000053402

Description

gamma-aminobutyric acid type A receptor subunit theta [Source:RGD Symbol;Acc:68331]

Location

GRCr8:CM070411.1

About this gene

This gene has 2 transcripts (splice variants), 87 orthologues, 41 paralogues and is associated with 4 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000078419.3	Gabrq-201	6127	640aa	ENSRNOP00000068820.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KSY1 G3V875	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000107625.2	Gabrq-202	2746	525aa	ENSRNOP00000089871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GHR1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.