Gene: Slc48a1 ENSRNOG00000053196

Description

solute carrier family 48 member 1 [Source:RGD Symbol;Acc:1562880]

Gene Synonyms

HRG-1, Hrg1, LOC300191, MGC125237

Location

GRCr8:CM070397.1

About this gene

This gene has 2 transcripts (splice variants) and 260 orthologues.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000105518.2	Slc48a1-202	2516	146aa	ENSRNOP00000077408.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0BNL4-2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000079388.3	Slc48a1-201	1715	89aa	ENSRNOP00000071123.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R3J2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.