Gene: Hcfc1 ENSRNOG00000051948

Description

host cell factor C1 [Source:RGD Symbol;Acc:1563804]

Gene Synonyms

HCF, HCF-1, LOC100911260, LOC363519, RGD1563804

Location

GRCr8:CM070411.1

About this gene

This gene has 2 transcripts (splice variants), 158 orthologues, 10 paralogues and is associated with 30 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000113938.2	Hcfc1-202	8942	2091aa	ENSRNOP00000084541.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A285	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000112258.2	Hcfc1-201	7035	2022aa	ENSRNOP00000081395.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZS53 A0A8L2UQY5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,