Gene: Tcf3 ENSRNOG00000051499

Description

transcription factor 3 [Source:RGD Symbol;Acc:620914]

Gene Synonyms

LOC100364490, LOC688265, Pan2, TCF-3, Tcfe2a

Location

Primary_assembly 7: 9,928,685-9,953,044 forward strand.

GRCr8:CM070397.1

About this gene

This gene has 4 transcripts (splice variants), 275 orthologues, 2 paralogues and is associated with 18 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000077122.3	Tcf3-201	2925	662aa	ENSRNOP00000074654.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K8L6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000133650.1	Tcf3-204	3277	627aa	ENSRNOP00000104453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000085899.3	Tcf3-202	2937	648aa	ENSRNOP00000071280.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K030	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000118873.2	Tcf3-203	2448	614aa	ENSRNOP00000087531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A3B8	-