Gene: Clnk ENSRNOG00000051169

Description

cytokine-dependent hematopoietic cell linker [Source:RGD Symbol;Acc:1562417]

Gene Synonyms

LOC295518, Mist, RGD1562417

Location

Primary_assembly 14: 76,136,881-76,313,512 forward strand.

GRCr8:CM070404.1

About this gene

This gene has 4 transcripts (splice variants), 126 orthologues, 3 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000141179.1	Clnk-204	2023	461aa	ENSRNOP00000105649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000076730.4	Clnk-201	2186	447aa	ENSRNOP00000068476.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MKD7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000107673.2	Clnk-203	1902	409aa	ENSRNOP00000078642.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZLA7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000088197.3	Clnk-202	1813	413aa	ENSRNOP00000075554.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KAW6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,