Gene: Pate1 ENSRNOG00000049600

Description

prostate and testis expressed 1 [Source:RGD Symbol;Acc:2319716]

Gene Synonyms

LOC100361657, Pate

Location

GRCr8:CM070398.1

About this gene

This gene has 1 transcript (splice variant), 77 orthologues, 22 paralogues and is associated with 5 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000073753.3	Pate1-201	604	125aa	ENSRNOP00000067883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H8Y6J3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.