Gene: Gjc1 ENSRNOG00000048838

Description

gap junction protein, gamma 1 [Source:RGD Symbol;Acc:628889]

Gene Synonyms

Cx45, Cxnq, Gja7

Location

Primary_assembly 10: 88,249,489-88,285,853 reverse strand.

GRCr8:CM070400.1

About this gene

This gene has 10 transcripts (splice variants), 255 orthologues, 18 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000165769.1	Gjc1-209	26482	396aa	ENSRNOP00000109015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654ICN4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000162959.1	Gjc1-208	10055	396aa	ENSRNOP00000106010.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654ICN4	-
ENSRNOT00000108179.2	Gjc1-203	9342	396aa	ENSRNOP00000087322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654ICN4 A4GG66	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000151731.1	Gjc1-206	7426	396aa	ENSRNOP00000108487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654ICN4	-
ENSRNOT00000096574.2	Gjc1-202	6988	396aa	ENSRNOP00000081758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654ICN4 A4GG66	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000116881.2	Gjc1-204	6580	396aa	ENSRNOP00000096467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654ICN4 A4GG66	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000160044.1	Gjc1-207	3609	396aa	ENSRNOP00000107543.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654ICN4	-
ENSRNOT00000117898.2	Gjc1-205	3212	396aa	ENSRNOP00000094267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654ICN4 A4GG66	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000093570.3	Gjc1-201	3031	396aa	ENSRNOP00000076255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654ICN4 A4GG66	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000170911.1	Gjc1-210	2393	396aa	ENSRNOP00000099947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654ICN4	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Gjc1 ENSRNOG00000048838

Strains

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Gjc1 ENSRNOG00000048838

Strains

About Us

Get help

Our sister sites

Follow us