Gene: Hdac6 ENSRNOG00000048738

Description

histone deacetylase 6 [Source:RGD Symbol;Acc:619981]

Gene Synonyms

LOC100911205, LOC108348065

Location

Primary_assembly X: 17,222,856-17,244,370 forward strand.

GRCr8:CM070411.1

About this gene

This gene has 3 transcripts (splice variants), 179 orthologues, 11 paralogues and is associated with 26 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000064924.4	Hdac6-202	4019	1189aa	ENSRNOP00000063689.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZVD8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000116471.2	Hdac6-203	4173	1183aa	ENSRNOP00000096671.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GM68	-
ENSRNOT00000009295.8	Hdac6-201	4095	1157aa	ENSRNOP00000009295.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2QC41	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,