Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Nup62 ENSRNOG00000048733

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Description

nucleoporin 62 [Source:RGD Symbol;Acc:619938]

Gene Synonyms

Np62

Location

Primary_assembly 1: 104,432,093-104,452,710 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 8 transcripts (splice variants), 169 orthologues, 1 paralogue and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000126621.1	Nup62-205	17275	525aa	ENSRNOP00000099569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000117253.2	Nup62-203	7625	525aa	ENSRNOP00000081212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P17955	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000123208.1	Nup62-204	6910	525aa	ENSRNOP00000100099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000027320.10	Nup62-201	6115	525aa	ENSRNOP00000027320.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZN20	-
ENSRNOT00000155881.1	Nup62-208	6044	525aa	ENSRNOP00000103918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000138345.1	Nup62-207	4822	525aa	ENSRNOP00000112754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000132591.1	Nup62-206	3671	525aa	ENSRNOP00000103649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000074847.4	Nup62-202	2849	525aa	ENSRNOP00000067556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P17955	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data