Gene: Pja1 ENSRNOG00000047339

Description

praja ring finger ubiquitin ligase 1 [Source:RGD Symbol;Acc:1591532]

Gene Synonyms

LOC683077

Location

Primary_assembly X: 68,620,084-68,638,407 reverse strand.

GRCr8:CM070411.1

About this gene

This gene has 3 transcripts (splice variants), 126 orthologues, 1 paralogue and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000144187.1	Pja1-203	4381	623aa	ENSRNOP00000111059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000113821.2	Pja1-202	4155	623aa	ENSRNOP00000090937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEG5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000074071.4	Pja1-201	2412	403aa	ENSRNOP00000067423.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0RCT9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,