Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
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Supporting evidence
ID History
- Gene history

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Gene: Spetex2l1 ENSRNOG00000046576

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Description

Spetex-2 protein like 1 [Source:RGD Symbol;Acc:1562800]

Gene Synonyms

LOC302192, LOC681180, LOC691428

Location

Primary_assembly 9: 6,409,080-6,416,731 forward strand.

GRCr8:CM070399.1

About this gene

This gene has 1 transcript (splice variant), 120 orthologues and 201 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000050464.6	Spetex2l1-202	1405	202aa	ENSRNOP00000050086.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9K3Y8A8 A4FTZ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data