Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Tnfsf12 ENSRNOG00000045670

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Description

TNF superfamily member 12 [Source:RGD Symbol;Acc:1359620]

Gene Synonyms

Tnlg4a

Location

Primary_assembly 10: 54,902,616-54,911,913 reverse strand.

GRCr8:CM070400.1

About this gene

This gene has 3 transcripts (splice variants), 84 orthologues, 2 paralogues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000103245.2	Tnfsf12-203	1462	298aa	ENSRNOP00000082327.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZXQ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000102944.2	Tnfsf12-202	1538	249aa	ENSRNOP00000091485.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0U5J4Y0 Q6AYC1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000064401.4	Tnfsf12-201	1502	237aa	ENSRNOP00000063489.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8J8Y2A3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data