Gene: Fubp1 ENSRNOG00000043370

Description

far upstream element binding protein 1 [Source:RGD Symbol;Acc:1591892]

Gene Synonyms

FBP

Location

Primary_assembly 2: 243,819,218-243,846,428 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 6 transcripts (splice variants), 179 orthologues, 15 paralogues and is associated with 19 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000094623.2	Fubp1-202	2577	675aa	ENSRNOP00000077531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5YBV8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000135698.1	Fubp1-205	4959	643aa	ENSRNOP00000111951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000132758.1	Fubp1-204	3270	632aa	ENSRNOP00000103007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000157036.1	Fubp1-206	3259	660aa	ENSRNOP00000099811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000110491.2	Fubp1-203	2782	645aa	ENSRNOP00000095243.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6APY2	-
ENSRNOT00000066199.5	Fubp1-201	2371	666aa	ENSRNOP00000061544.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140TAJ3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,